Resources in Bioinformatics

NCBI Hand Book ,The National Library of Medicine.

My NCBI Help, The National Library of Medicine.

PubMed Help, The National Library of Medicine.

SNP FAQ Archive, The National Library of Medicine.

Entrez Help, The National Library of Medicine.

NCBI Short Courses, The National Library of Medicine.

Bio-Informatics: A computational approach to molecular biology.

Computional Molecular Biology

Bioinformatics Frequently Asked Questions (FAQ)

Online Course and Tutorials in Bioinformatics

Biocomputing Course Resource List : Course Syllabi

NCBI Home Page

PCR PRIMER DESIGN AND REACTION OPTIMISATION
Ed Rybicki, Department of Molecular and Cell Biology, University of Cape Town

PHYLIP - Phylogeny Inference Package

Clustal W: A general purpose multiple sequence alignment program for DNA or proteins.

Translate a DNA Sequence : Translation of nucleotide sequence into Amino acids.

Sequence Manipulation Suite-2 : A collection of JavaScript programs for generating, formatting, and analyzing short DNA and protein sequences. It is commonly used by molecular biologists, for teaching, and for program and algorithm testing. Download.

NCBI BLAST

DNA Mutation Checker, EMBL- Europian Bioinformatics Institute.

Sequence Variation Database Project, EMBL- Europian Bioinformatics Institute.

Free Educational Software Available from DNASTAR

Primer3 : A tool for Primer designing.

PrimerX: Automated design of mutagenic primers for site-directed mutagenesis.

Sequencher: A preferred software for DNA sequence analysis (Demo version).

The NetNglyc 1.0 Server predicts N-Glycosylation sites in human proteins using artificial neural networks that examine the sequence context of Asn-Xaa-Ser/Thr sequons.

The NetOglyc 3.1 Server produces neural network predictions of mucin type GalNAc O-glycosylation sites in mammalian proteins.

The Molecular Toolkit: A group of programs for analysis and manipulation of nucleic acid and protein sequence data. Help

WebinTool Users Guide, Roslin Institute Bioinformatics
WebinTool package is freely available at Here1 & Here2

Structure and Interpretation of Computer Programs 2nd Edition.

Pedros's directory of biomolecular Research Tools.

POPGENE: A program for population genetics analysis.

PLABQTL & PLABSTAT- A program for composite interval mapping of QTL.

LAMARC - A package of programs for computing likelihoods for samples of data (sequences and electrophoretic polymorphisms) from populations.

QTL Cartographer : A package of programs that will aid in locating the genes that control quantitative traits using a molecular map of markers. Download

Multimapper: Bayesian QTL mapping software for inbred lines (distributed as C source code)

An Alphabetic list of Genetic Analysis Software

Bioinformatics Worlds: A collection of evaluated bioinformatics programs and databases
created by Herbert Mayer.